Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (255), Expect = 1e-26
 Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 2/177 (1%)

Query: 139 EKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYN 198
           ++L    L L+ L + D LT + NR   D  L      A  D+   +LLMID+D FK YN
Sbjct: 155 QQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMRDQSQLSLLMIDVDYFKAYN 214

Query: 199 DGYGHIQGDDVLRKVSQTLRQWKSN-LDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAM 257
           D +GH++GD+ LRKV+  +R+  S   DL  RYGG+EF + +        +  AEKL   
Sbjct: 215 DNFGHLEGDEALRKVATAIREACSRPSDLPARYGGEEFALVLPGTSPGGARLMAEKLRQG 274

Query: 258 IHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
           +  L IPH +    +++TI++G+      ++     +L+  ADK L+ AKH  R  +
Sbjct: 275 VVALKIPHTTPDGGENLTISIGVSTITP-QQGGDCRQLISAADKGLYLAKHNGRNRV 330