Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)

Query: 36  YIEAWGGTDSERHHNPSYLVGLNQYDVLPAAQAAWFTDVIQQAIEQGCAKELEYEIDP-- 93
           ++E   G   +  HN  +      + + P     WF+  ++     G      +E  P  
Sbjct: 39  FMENRSGVQPKDAHNQHF------FSLFPEIDRQWFSRKVESVATLGTPAFTVWEQRPYL 92

Query: 94  TQLPCFDNVPGPSQKQYFSALVIPLPNTD-------MMLWTVRNISDYKHTVEKLAQHQL 146
            +   +  + G     Y +  ++PL + D       ++++ V +++  +H ++  A  QL
Sbjct: 93  IRFKSYQPITGQEAFMYQNTTLLPLRSPDNTIKHICLVIYDVTDVATNRHQLQA-ANAQL 151

Query: 147 ELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSAL--LMIDIDCFKEYNDGYGHI 204
           +L  L+  D LT +YNR   +S L  A   AR  R   AL  +M+DID FK  ND YGH 
Sbjct: 152 QL--LSSTDRLTGLYNRGHWESDLKAAY--ARHQRYGHALSLVMLDIDHFKRVNDTYGHQ 207

Query: 205 QGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNIP 264
            GD V+ +V++ LR+   + D+  RYGG+EF + ++  D+      AE++   +  L + 
Sbjct: 208 AGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAERMRHSVEALEVL 267

Query: 265 HLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKH--EQRGTIH 315
           +    +    TI++G+    Q   +     L+  AD+AL+ +K     R T+H
Sbjct: 268 YNDQTI--RFTISLGVADLSQPSNDHA--DLIARADQALYTSKKTGRNRVTVH 316