Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., COG2199: FOG: GGDEF domain from Pseudomonas fluorescens FW300-N2E2

 Score =  109 bits (272), Expect = 1e-28
 Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 13/229 (5%)

Query: 87  LEYEIDPTQLPCFDNVPGPSQKQYFSALVIPLPNTDMMLWTVRNISDYKHTVEKLAQHQL 146
           LE +++  Q    DN+    ++Q+   L +   + D M   V        T E  A +Q 
Sbjct: 228 LERQVNTLQ----DNLRAHLERQHSDELALAA-SRDQMAELVE-----ARTAELKAANQA 277

Query: 147 ELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYNDGYGHIQG 206
            LE L+  D LT + NR   D L       A   +   A+LM D+D FK YND YGH+QG
Sbjct: 278 -LEALSRHDDLTGLANRRYFDELKEIEFRRAIRHKTPLAVLMCDVDFFKIYNDTYGHMQG 336

Query: 207 DDVLRKVSQTLRQ-WKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNIPH 265
           D  L+++++TLR  +  + +L  R GG+EF++ +  +DA Q  + A++L A + E  +PH
Sbjct: 337 DLCLKEIAETLRSVFGRSGELTARVGGEEFVVVLPNIDAAQACEAAQRLRASLAERELPH 396

Query: 266 LSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
             S+V+  VT+++G+   D  E     ++L+  AD+AL+ AKH+ R  I
Sbjct: 397 SGSKVSPFVTVSIGVAELDP-ETMDHFDQLLQRADQALYRAKHKGRDCI 444