Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 96.3 bits (238), Expect = 9e-25
 Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 22/290 (7%)

Query: 36  YIEAWGGTDSERHHNPSYLVGLNQYDVLPAAQAAWFTDVIQQAIEQGCAKELEYEIDPTQ 95
           ++E   G   E   N S+      + + P     WF   ++  +  G      +E  P  
Sbjct: 39  FMENRSGLQPETARNQSF------FTLFPEVDEDWFRRKVESVMTLGTPSFTIWEQRPYL 92

Query: 96  LPC--FDNVPGPSQKQYFSALVIPLP----NTDMMLWTVRNISDYKHTVEKLAQHQLELE 149
           L    +  + G     Y +  ++PL     + D +   + +++D      +L     EL+
Sbjct: 93  LRFKNYQPITGLEDFMYQNTTLLPLKGINGSIDQVCLIIYDVTDVAVNRRQLQAANAELQ 152

Query: 150 HLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSS--ALLMIDIDCFKEYNDGYGHIQGD 207
            L+  D LT +YNR   + +L   LD AR  R  S  AL+M DID FK  ND YGH  GD
Sbjct: 153 RLSSTDRLTGLYNRGHWEEML--RLDYARHRRYDSQAALVMFDIDHFKAINDSYGHQVGD 210

Query: 208 DVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNIPHLS 267
            V+++V+  +R+   + D+  RYGG+EF++ +   D +     AE+L   +    + H  
Sbjct: 211 SVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGALIFAERLRQAVEAREVRHEQ 270

Query: 268 SRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAK--HEQRGTIH 315
            R+    TI++G+   D      +  +L+  AD AL+ +K     R T+H
Sbjct: 271 YRI--RFTISLGV--ADLSMPTTSHAQLIEWADSALYVSKACGRNRVTLH 316