Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 2/179 (1%)

Query: 141 LAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYNDG 200
           L Q    LE +   D LT + NR   D  L      AR +R   +L++ID D FK YND 
Sbjct: 347 LIQLNQHLELIASEDKLTGLANRRRFDQFLEVEFKRARRERSPLSLILIDADHFKRYNDH 406

Query: 201 YGHIQGDDVLRKVSQTLRQW-KSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIH 259
           YGH+ GD+ L  +++ + Q+ +   D+  RYGG+E  + +   D    +Q AEK++  I 
Sbjct: 407 YGHLAGDECLIALARVVEQFIRRPSDVAARYGGEEIAVVLPGTDESNARQVAEKILRAIR 466

Query: 260 ELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTIHMFS 318
           +  I H +S     VTI++G+      ++++    L+ +AD+AL+ AK + R  +++ S
Sbjct: 467 DEQIEHPASPFG-IVTISLGVATFVGTDRQLDQRGLIELADRALYAAKSQGRNRVNVAS 524