Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  121 bits (304), Expect = 2e-32
 Identities = 83/310 (26%), Positives = 151/310 (48%), Gaps = 17/310 (5%)

Query: 9   IIANPEILQFIFQSLPEPTFLINKKGVYIEAWGGTDSERHHNPSYLVGLNQYDVLPAAQA 68
           +IAN +++  + ++LP+P F+++  G Y+  +GG+D+  +H+   L+G   ++V+  A+A
Sbjct: 1   MIANEQMVA-VLEALPDPAFILSSSGKYVAVFGGSDARYYHDGRGLIGAYLHEVIKPAKA 59

Query: 69  AWFTDVIQQAIEQGCAKELEYEIDPTQLPCFDNVPGPSQKQYFS----ALVIPLPNTDMM 124
           AWF   I +A+        EYE+    +    +  GP    +F     AL   +   +++
Sbjct: 60  AWFLQTIDRALSTRHLLIEEYELSNKDVKGLPD-EGPVAPIWFEGRIQALDFRVDGEEVV 118

Query: 125 LWTVRNISDYKHTVEKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSS 184
           LW   NIS  +H +E      L L  L+  D LT +YNR  ++       D      + +
Sbjct: 119 LWVASNISK-RHELE------LRLRELSDTDQLTGLYNRRRLERDFALHFDNFSEQGMPT 171

Query: 185 ALLMIDIDCFKEYNDGYGHIQGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDA 244
            +LM+DID  K+ ND  GH +GD+ +  V++  R+     D  +R+GGDEF++ +  +  
Sbjct: 172 TILMLDIDNLKQINDAKGHHKGDENILAVAEICRREFRKTDYAYRFGGDEFVVVLPGLLP 231

Query: 245 KQCQQRAEKLMAMIHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALF 304
            Q     E L    H+     LS+   D +  T+ +        + + +  +  AD AL+
Sbjct: 232 TQAMAMVEAL----HQSFNRALSTLAEDELLATISLGMTGIKAGDTSYQDTLRRADMALY 287

Query: 305 HAKHEQRGTI 314
            AK + +  +
Sbjct: 288 QAKDQGKNQL 297