Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 21/294 (7%)

Query: 37  IEAWGGTDSERHH--NPSYLVGLNQYDVLPAAQAAWFTDVIQQAIEQGCAKELEYEIDPT 94
           I+ W G   E H   +P+ + G N +D      A W    ++          + +E  P 
Sbjct: 34  IQLWNGF-MENHSGISPNSIKGKNIFDQFDYLPANWLKQKMESVFLLKNRAFISWEQRPY 92

Query: 95  QLPCFDN---VPGPSQKQYFSALVIPLPNTDMMLWTVRNISDYKHTVEKLAQHQLEL--- 148
               F N   + G +   Y +  ++PL +   +   + +IS   + V  +A ++L+L   
Sbjct: 93  VFK-FGNYRPITGRADFMYQNVTLLPLSS---LTGQITHISMIIYDVTDVAINKLQLKAA 148

Query: 149 ----EHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYNDGYGHI 204
               EHL+  D LTQ++NR      + +  D        + L+M DID FK  ND YGHI
Sbjct: 149 NERLEHLSQTDGLTQLHNRRHWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHI 208

Query: 205 QGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNIP 264
            GD V++ VS  LRQ   + D   RYGG+EF + ++  +A+     A++L   I    + 
Sbjct: 209 AGDRVIQHVSHILRQSLRDTDCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELR 268

Query: 265 HLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTIHMFS 318
             S+ +   VT+++GI  C   E    + + +  AD AL+ AK + R    +F+
Sbjct: 269 FESAIL--KVTVSIGI--CGIDEHLSNSAQWLGQADSALYQAKQKGRNCCVIFN 318