Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  106 bits (265), Expect = 7e-28
 Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 9/292 (3%)

Query: 29  LINKKGVYIEAWGGTDSERHH-NPSYLVGLNQYDVLPAAQAAWFTDVIQQAIEQGCAKEL 87
           LI+ +G  ++ W    +ER   +   + G    +V P    +     +Q A++Q     L
Sbjct: 24  LIDAEGK-VQLWNRWLAERSGVSAQEIQGRRLEEVFPHLANSRLAHAVQTALQQQLPAIL 82

Query: 88  EYEIDPTQLPCFDNVPGPSQKQYFSALVIPLPNTDMMLWTVRNISDYKHTV---EKLAQH 144
              ++    P  D++   +     +  + PL      +  +  I D    V   ++L + 
Sbjct: 83  SQTLNRRPFPLQDHLHNDAHPIEQAITIAPLARESGHIHCLIQIQDVTAAVRREQQLREQ 142

Query: 145 QLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYNDGYGHI 204
             +L+ L+++D LT V NR + D+   +    A+      ++LM+DID FKEYND YGH 
Sbjct: 143 AQQLQALSNIDGLTGVANRRSFDARFQEEFQRAQRHGSDISVLMLDIDYFKEYNDCYGHQ 202

Query: 205 QGDDVLRKVSQTLRQ-WKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNI 263
            GD  L  V+ TLR+  +   D   RYGG+EF + +         + A  L   I  L I
Sbjct: 203 AGDTCLTVVANTLRRCLQRGGDFVARYGGEEFAVVLPGASHGAACKLASSLQQEISRLGI 262

Query: 264 PHLSSRVADHVTITVGI-RHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
           PH +S  A H++I+VG+  H  Q  +   A+ L+  AD AL+ AK + R  +
Sbjct: 263 PHANSHAASHLSISVGVATHTPQ--RNDRAQDLLRGADIALYQAKRQGRNRV 312