Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (257), Expect = 9e-27
 Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 141 LAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYNDG 200
           L ++Q +LE +   D LT   NR   +    QALD A+L + S ++L+IDID FK+ ND 
Sbjct: 313 LGRYQRKLEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDS 372

Query: 201 YGHIQGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHE 260
           YGH  GD VL+ V+  LR      D+  R+GG+EFL+ +  +D  +  + AE+    I +
Sbjct: 373 YGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQ 432

Query: 261 LNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
             +      +A  +T+++G+    ++E    AE L+  AD AL+ AK   R  +
Sbjct: 433 RELKVNGVHIA--ITVSIGVAEYQKLE---PAEDLIKRADLALYQAKEAGRNQV 481