Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 15/216 (6%)

Query: 105 PSQKQYFSALVIPLPNTDMMLWTVRNISDYKHTVEKLAQHQLELEHLTHMDHLTQVYNRY 164
           P+Q +    LV    +T +   T   +S Y+H + +        E    +D LT + NR 
Sbjct: 265 PTQGEAVMLLVSFAASTTL---TTLGLSLYRHLLAQAGARATMWEQRAGIDPLTGLCNRA 321

Query: 165 AMDSLLPQALDIARLDRVSS--ALLMIDIDCFKEYNDGYGHIQGDDVLRKVSQTLRQWKS 222
             D +L    ++ RL R  S  +L+M D D FK YND YGH+ GD  L++V+  LR    
Sbjct: 322 RFDEVL--LAELQRLQRQDSPLSLMMFDADHFKPYNDMYGHVAGDACLKRVAGVLRAVAH 379

Query: 223 NL-DLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAMIHELNIPHLSSRVADHVTITVG-- 279
              D+  RYGG+EF+  +   D       AEK+   +  L IPH+ S VA  +T++ G  
Sbjct: 380 RASDVVARYGGEEFVCILPGTDRDSAYALAEKVRQGVRALAIPHVGSPVAGVLTVSAGVV 439

Query: 280 -IRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
            +  CD ++     +++V   D+AL+ AK   R  +
Sbjct: 440 TVHGCDGLD----PQEVVAQVDRALYQAKGAGRDRV 471