Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 4/177 (2%)

Query: 138 VEKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEY 197
           +E++   Q EL++    D LT ++NR        +    A + +   A+++ DID FK  
Sbjct: 394 LEEIKASQEELKYQAATDSLTHLFNRRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRV 453

Query: 198 NDGYGHIQGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAM 257
           ND YGH+ GD V+  ++ TL+Q     D+  RYGG+EF++ +  V   +  Q AE++ + 
Sbjct: 454 NDKYGHLMGDQVIIDIATTLKQHARKCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSA 513

Query: 258 IHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
           + EL+     ++ A  VT+++G+   D +      E  + +AD AL+ AKH+ R  +
Sbjct: 514 VAELSF-MAETQEAFTVTLSLGVAAVDFVH---PLEHAIKLADDALYRAKHQGRNNV 566