Pairwise Alignments

Query, 296 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., protein of unknown function UPF0052 and CofD (RefSeq) from Shewanella loihica PV-4

 Score =  267 bits (683), Expect = 2e-76
 Identities = 143/290 (49%), Positives = 191/290 (65%), Gaps = 5/290 (1%)

Query: 2   SLYENKKVVAIGGGHGLGRMLAALKVFGSNATGIVTTTDNGGSTGRIRHCQGGIAWGDTR 61
           ++ + + VVAIGGGHGLGR+L++L   G   TGIV TTDNGGSTGR+R  Q  IAWGD R
Sbjct: 5   AINQYQHVVAIGGGHGLGRVLSSLSFLGPKLTGIVATTDNGGSTGRLRQQQDCIAWGDLR 64

Query: 62  NCINQLITEPSISSMMFEYRFKGAGELNGHNLGNLMLTALDNLSVRPLDAINLIRNMLKV 121
           NC++QL + PS+ S++FEYRF G  EL  HNLGNL+L ALD+L VRPLDA+NLIR +L +
Sbjct: 65  NCLSQLASRPSVGSLLFEYRFGGNSELANHNLGNLVLMALDDLCVRPLDAVNLIRKLLNI 124

Query: 122 DVNILPMSEHPSDLAALAMDGKWVTGETSVDEMTQDLRRLDLAPEVPATKEAVTAIQDAD 181
           +  ++PMSE P+ L A+   G  + GE  VD+  +D   L L P V AT EA  A++ AD
Sbjct: 125 ETKVIPMSEQPTHLVAIQSCGNRIFGEVEVDQKCEDPIALSLEPMVGATLEACEAVRQAD 184

Query: 182 CVILGPGSFLTSVMPPLLLPELGKAIARNQTAKVIFVENLSPEYGPAGRMSLEQKLEWCE 241
            +ILGPGSFLTS+MPPLLLP+L +A+  ++ AKVI ++NL+ E   A   SLE++L W +
Sbjct: 185 LIILGPGSFLTSIMPPLLLPKLAEALHASK-AKVILIDNLTQEPSAAANFSLEKRLGWFK 243

Query: 242 RACQGRKIDVVLGHHPHPELEQRWNFVTR-DLASANRDWRHDRQKLRQAI 290
           +    + +D VL    H +       VT   L S +    HDR  L  A+
Sbjct: 244 QVMGNKAVDHVL---CHGDRYLTTGIVTHYPLRSRHHQALHDRAALADAL 290