Pairwise Alignments

Query, 296 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  289 bits (739), Expect = 6e-83
 Identities = 153/282 (54%), Positives = 193/282 (68%), Gaps = 3/282 (1%)

Query: 9   VVAIGGGHGLGRMLAALKVFGSNATGIVTTTDNGGSTGRIRHCQGGIAWGDTRNCINQLI 68
           VVAIGGGHGLGR+L++L   G+  TGIV TTDNGGSTGR+R  Q  IAWGD RNC++QL 
Sbjct: 11  VVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAWGDLRNCLSQLA 70

Query: 69  TEPSISSMMFEYRFKGAGELNGHNLGNLMLTALDNLSVRPLDAINLIRNMLKVDVNILPM 128
             PS+ S +FEYRF+G  EL+GHNLGNLML ALD L VRPL+A+NLIR+MLK++ NI+PM
Sbjct: 71  HRPSVGSQLFEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRHMLKIETNIIPM 130

Query: 129 SEHPSDLAALAMDGKWVTGETSVDEMTQDLRRLDLAPEVPATKEAVTAIQDADCVILGPG 188
           SE P+ L AL   G  V GE +VD+M +    L L P+V AT EA  AI+ AD +ILGPG
Sbjct: 131 SEQPTHLVALQASGSKVFGEVNVDKMNEAPIALCLEPQVNATTEACEAIRRADLIILGPG 190

Query: 189 SFLTSVMPPLLLPELGKAIARNQTAKVIFVENLSPEYGPAGRMSLEQKLEWCERACQGRK 248
           SFLTS+MPPLLLP   KA+A   TA V+F++NL+ E  PAG+ S+EQ++ WC +      
Sbjct: 191 SFLTSIMPPLLLPCFAKALAMT-TAPVVFIDNLNEEASPAGQFSIEQRISWCHQVIGKPV 249

Query: 249 IDVVLGHHPHPELEQRWNFVTRDLASANRDWRHDRQKLRQAI 290
           I  VL H     L    N+    L + +    HD+  LR A+
Sbjct: 250 ITKVLRHSEQLRLGTLVNYF--PLRNRHNPQLHDQASLRDAL 289