Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., Two-component sensor CbrB: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N2E2

 Score =  282 bits (722), Expect = 1e-80
 Identities = 159/387 (41%), Positives = 226/387 (58%), Gaps = 18/387 (4%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +VED   + +  R  L      ++  G+ ++A E       DLI+ DLRLP   G +++ 
Sbjct: 6   IVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTELI- 64

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIR------- 113
              +     P++ MT++ S+ +AV++M+ GA D++ KP + D +   V   +R       
Sbjct: 65  ---KLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQAATS 121

Query: 114 -------KASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGK 166
                  KAS       + N    G IGS   MQ +Y  I   A + +++ I GESGTGK
Sbjct: 122 NPAEPAGKASASTKAGASNNNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQGESGTGK 181

Query: 167 EVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGG 226
           E+ A A+H  S+R   P I++NCAAIP+ LIESELFGH KGAFTGA+  R G  EAADGG
Sbjct: 182 ELVARALHNLSRRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADGG 241

Query: 227 TLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFR 286
           TLFLDE+ E+ L+ Q +LLR +Q G  ++VGS + + VDVR + AT+RD     + G+FR
Sbjct: 242 TLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQFR 301

Query: 287 EDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWP 346
           EDLYYRL+VI L LP LR RG DV EIA + L   S    +  ++ + +  +  R Y WP
Sbjct: 302 EDLYYRLHVIALKLPALRERGADVNEIAQAFLARQSARVNRTDLKFAPDAEQAIRHYAWP 361

Query: 347 GNVRQLQNVLRNVVVLNEGREITLDML 373
           GNVR+L+N +   V+L E  EI+ D+L
Sbjct: 362 GNVRELENAVERAVILCESPEISADLL 388