Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

 Score =  283 bits (725), Expect = 7e-81
 Identities = 174/462 (37%), Positives = 259/462 (56%), Gaps = 17/462 (3%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  S+  +    L    +      +    +  + R++PD+I+ D+R+P  +G+D+L 
Sbjct: 9   IVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDLLA 68

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            ++E+ P +P++ MTAH  +D+AV + + GA ++L KP + D     V  A + A + + 
Sbjct: 69  RIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQG 128

Query: 121 --DVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASK 178
             +V    +  +  IG +  MQ V+R I   + S  ++ I GESGTGKE+ A A+H  S 
Sbjct: 129 MEEVPALARTPE-IIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSP 187

Query: 179 RGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDL 238
           R   PFIA+N AAIPKDL+ESELFGH KGAFTGAA  R+G  E ADGGTLFLDE+ +M  
Sbjct: 188 RAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPA 247

Query: 239 DLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPL 298
           D QT+LLR +  G F +VG      VDVR + AT+++    V  G+FREDL++RL VI +
Sbjct: 248 DTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIRI 307

Query: 299 HLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRN 358
           H+P L  R +D+  +A   L   ++E   +   L +E  E  +   WPGNVRQL+N  R 
Sbjct: 308 HIPRLADRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCRW 367

Query: 359 VVVLNEGREITLDMLPP---PLNQMSAPI---NRAL------PLAHENKVSVHEIFPLWM 406
           + V+  GRE+ +  LPP    L Q SAP+    +AL       L+      +    P + 
Sbjct: 368 ITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALSRGQSSLLDSAVPSF- 426

Query: 407 TEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTWNEKV 448
            E+  IE A++   G    AA  L    +T+ RK++    KV
Sbjct: 427 -ERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMKV 467