Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  290 bits (743), Expect = 5e-83
 Identities = 162/444 (36%), Positives = 254/444 (57%), Gaps = 9/444 (2%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           ++ED  + A L   +LT    +I +V   + + + +   E DL+L+D RLPD TG++VL 
Sbjct: 6   ILEDDTTFAQLLEGFLTKNGHEITLVTQVKQSFKQVENNEFDLLLIDYRLPDGTGLEVLS 65

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +++    +P + MT+   + TAV +++ GA D++ KP   D L + + N++ K  K   
Sbjct: 66  HIRDLGLSIPAIVMTSFNDVRTAVRSIQLGAFDYITKPVNPDELLMVIKNSLTK--KDLK 123

Query: 121 DVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRG 180
            V+ K  N     G S     +Y  I+  A +  S+ I GESGTGKE  A  +H  SKR 
Sbjct: 124 SVEPKETNSDFIKGKSAIADKLYEHINLVAPTDMSVIIQGESGTGKEFAARTLHQQSKRA 183

Query: 181 DKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDL 240
           DKPF+AI+C A+ KDL  SELFGHVKGAFTGA  +++G  EAA+GGTLFLDE+  +  ++
Sbjct: 184 DKPFVAIDCGALSKDLAASELFGHVKGAFTGALNDKKGQFEAANGGTLFLDEVGNLSYEV 243

Query: 241 QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHL 300
           Q KLLR +Q    Q +GS+K   V+VR + ATN D    +Q+G FREDLY+RL    + L
Sbjct: 244 QIKLLRALQERVIQPLGSTKQIPVNVRIITATNDDLANSMQQGEFREDLYHRLNEFKIQL 303

Query: 301 PPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVV 360
           PPLR RG D+       +   +++  ++   +S+E       Y+WPGN+R+L NV++ +V
Sbjct: 304 PPLRDRGGDLELFINHFIQLSNRDLERNVKSVSSEAKALLLSYDWPGNLRELSNVIKRMV 363

Query: 361 VLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACD 420
           +L+ G    ++ LP  +  M +  +++ P    +  +V+E       EK  I + +    
Sbjct: 364 LLSPGDVAQINALPDEM--MISVHHQSAPGNSSDLKAVNE-----QNEKALITETLIKVR 416

Query: 421 GNIPRAATYLDVSPSTIYRKLQTW 444
            N  +AA  L++   T+Y K++ +
Sbjct: 417 HNKSKAAKILNIDRKTLYAKMERY 440