Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  281 bits (719), Expect = 3e-80
 Identities = 163/456 (35%), Positives = 251/456 (55%), Gaps = 20/456 (4%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  ++    +S+       +++V T  + I        D I+ D+RLP   G+D+L 
Sbjct: 12  IVDDDVAICQTLKSHFQKSAFQVSLVNTAEEGINVALSSNIDAIISDIRLPAKGGLDLLR 71

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            VK + P++PI+ +TA   ++  V AM+ GA D++ KP +   L   V+ A+  +S+ ++
Sbjct: 72  EVKAEKPELPIIMITAFHDMEMTVAAMQCGAMDYVPKPIDLPELDAAVSRALFASSRSEH 131

Query: 121 DVDNK------NQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIH 174
              +       +      +G S  M+ V++TI   A S+ +  I GESGTGKE+ A AIH
Sbjct: 132 VTGDPLIIGATDVTPTQIVGQSFAMKEVFKTIALVAQSRVTALILGESGTGKELVARAIH 191

Query: 175 AASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELC 234
            AS   D PFIA+NCAA+   L+ESELFGH +GAFTGA    +G  E    GTLFLDE+ 
Sbjct: 192 NASAEKDMPFIAVNCAALVDSLLESELFGHERGAFTGAVNAHKGKVEQVGEGTLFLDEVA 251

Query: 235 EMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLY 294
           E+   +Q KLLR ++   +  VGS+++K    RF+ ATN D    V  G FREDL+YRL 
Sbjct: 252 ELSPLIQGKLLRILEAREYSPVGSAQVKKSKARFIAATNVDLQARVASGEFREDLFYRLN 311

Query: 295 VIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQN 354
           V  ++LPPLR R  D+  +   LL  ++++  K+  R+S E +     + WPGNVRQL+N
Sbjct: 312 VASINLPPLRERQGDIPRLIDFLLRKINRDLRKNIRRVSGEAMACLNAFAWPGNVRQLEN 371

Query: 355 VLRNVVVLNEGREITLDMLPPPLNQMSAP-----INRALPLAHENKVSVHEIFPLWMTEK 409
           VL    V+  G  +T+D LPP +     P     I+ ++P   +N +S+ E+      EK
Sbjct: 372 VLMKAAVMERGDTLTIDRLPPEIRCSRMPISASGIDASIP---KNLLSLREM------EK 422

Query: 410 QAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTWN 445
             I   +E    +  +A   LD+S   + R++  +N
Sbjct: 423 NHIVHVLEKTGWHKGQACEILDISRPKLERRINEFN 458