Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., nitrogen assimilation regulatory protein from Klebsiella michiganensis M5al

 Score =  311 bits (796), Expect = 4e-89
 Identities = 183/461 (39%), Positives = 261/461 (56%), Gaps = 23/461 (4%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D +S+  +    LT   +      +G + ++++  + PD++L D+R+P M G+ +L 
Sbjct: 8   IVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKTPDVLLSDIRMPGMDGLALLK 67

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +K++ P +P++ MTAH  +D AV A + GA D+L KP + D     V+ AI    + + 
Sbjct: 68  QIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAISHYQEQQQ 127

Query: 121 DVDNK-NQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKR 179
             +   N      IG +  MQ V+R I   + S  S+ I GESGTGKE+ A A+H  S R
Sbjct: 128 PRNAPINSPTADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPR 187

Query: 180 GDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLD 239
              PFIA+N AAIPKDLIESELFGH KGAFTGA T RQG  E ADGGTLFLDE+ +M LD
Sbjct: 188 AKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQADGGTLFLDEIGDMPLD 247

Query: 240 LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLH 299
           +QT+LLR +  G F +VG      VDVR + AT+++    VQEG+FREDL++RL VI +H
Sbjct: 248 VQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVH 307

Query: 300 LPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNV 359
           LPPLR R +D+  +A   L   ++E G +  +L  E      +  WPGNVRQL+N  R +
Sbjct: 308 LPPLRERREDIPRLARHFLQIAARELGVEAKQLHPETEMALTRLAWPGNVRQLENTCRWL 367

Query: 360 VVLNEGREITLDMLPPPLNQMSAPIN------------------RALPLAHENKVSVHEI 401
            V+  G+E+    LP  L + + P N                  RAL   H+N +S  E 
Sbjct: 368 TVMAAGQEVLTQDLPSELFETAIPDNPTQMLPDSWATLLGQWADRALRSGHQNLLS--EA 425

Query: 402 FPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
            P    E+  +  A+    G+   AA  L    +T+ RKL+
Sbjct: 426 QP--EMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLK 464