Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., DNA-binding transcriptional regulator NtrC from Enterobacter sp. TBS_079

 Score =  310 bits (793), Expect = 8e-89
 Identities = 182/462 (39%), Positives = 262/462 (56%), Gaps = 24/462 (5%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D +S+  +    LT   +      +G + ++++  + PD++L D+R+P M G+ +L 
Sbjct: 8   VVDDDSSIRWVLERALTGAGLSCTTFESGSEVLDALTTKTPDVLLSDIRMPGMDGLALLK 67

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +K++ P +P++ MTAH  +D AV A + GA D+L KP + D     V  AI    + + 
Sbjct: 68  QIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQ 127

Query: 121 DVDNKNQN-YQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKR 179
                +       IG +  MQ V+R I   + S  S+ I GESGTGKE+ A A+H  S R
Sbjct: 128 PRHTPDFGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPR 187

Query: 180 GDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLD 239
              PFIA+N AAIPKDLIESELFGH KGAFTGA T RQG  E ADGGTLFLDE+ +M LD
Sbjct: 188 AKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLD 247

Query: 240 LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLH 299
           +QT+LLR +  G F +VG      VDVR + AT+++  + VQEG+FREDL++RL VI +H
Sbjct: 248 VQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVH 307

Query: 300 LPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNV 359
           LPPLR R +D+  +A   L   ++E G +  +L  E      +  WPGNVRQL+N  R +
Sbjct: 308 LPPLRERREDIPRLARHFLQVAARELGVEAKQLHPETDAALTRLAWPGNVRQLENTCRWL 367

Query: 360 VVLNEGREITLDMLPPPLNQMSAP-------------------INRALPLAHENKVSVHE 400
            V+  G+E+ +  LP  L + +AP                    +RAL   H+N +S  E
Sbjct: 368 TVMAAGQEVLIQDLPAELFEATAPESSTGHALPDSWATLLAQWADRALRSGHQNLLS--E 425

Query: 401 IFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
             P    E+  +  A+    G+   AA  L    +T+ RKL+
Sbjct: 426 AQP--EMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLK 465