Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., Probable excinuclease ABC (subunit B-helicase) UvrB from Mycobacterium tuberculosis H37Rv

 Score =  732 bits (1889), Expect = 0.0
 Identities = 379/684 (55%), Positives = 490/684 (71%), Gaps = 19/684 (2%)

Query: 5   FELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTIILA 64
           FE+VS + PAGDQP AI +L   + AG     LLG TG+GK+ T A +I   QRPT+++A
Sbjct: 7   FEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQRPTLVMA 66

Query: 65  PNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQMRL 124
           PNKTLAAQL  E++   P+NAVEYFVSYYDYYQPEAY+  TDT+IEKD+S+N  +E++R 
Sbjct: 67  PNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRH 126

Query: 125 SATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYSRN 184
           SAT ALL R+D V+VASVS IYGLG P SYL   + L+ G+ + +  +LR L ++QY+RN
Sbjct: 127 SATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVDVQYTRN 186

Query: 185 DMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARFTI 244
           DM+F RG FRVRG+ ++I P+  ++ AVR+E F DEIE +    PLTG +  R +    I
Sbjct: 187 DMSFTRGSFRVRGDTVEIIPSY-EELAVRIEFFGDEIEALYYLHPLTGEVI-RQVDSLRI 244

Query: 245 YPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELGFC 304
           +P THYV   ER+  A+  I+ EL  R   L    KLLE QR+  RT +DIEMM ++GFC
Sbjct: 245 FPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQVGFC 304

Query: 305 SGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLVE 364
           SGIENYSR++ GR  G PP TL DY P D LL+IDESHVTVPQIG M++GD SRK  LVE
Sbjct: 305 SGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKRNLVE 364

Query: 365 FGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDPII 424
           +GFRLPSA DNRPL ++EF     QT+++SATP  YEL+++GGE  EQV+RPTGL+DP +
Sbjct: 365 YGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLVDPKV 424

Query: 425 EVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDIDTV 484
            V+P   Q+DDL+ E R RA  D+R+LVTTLTK+MAEDLT+YL E G++VRYLHS++DT+
Sbjct: 425 VVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSEVDTL 484

Query: 485 ERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGRAA 544
            RVE++R LRLG +DVLVGINLLREGLD+PEV+LVAILDADKEGFLRS RSLIQT+GRAA
Sbjct: 485 RRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAA 544

Query: 545 RNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIM------ 598
           RNV+G+  +YAD IT SMR+AIDETERRR KQ+AYNE  GI PQPL++ + DI+      
Sbjct: 545 RNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQVYRE 604

Query: 599 -------ELG----DIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMY 647
                  E+G    + ++ R+ +      ++    E      +   +L   I  L A M 
Sbjct: 605 ADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLTAQMM 664

Query: 648 QHAQNLEFELAAQKRDEIHQLRQQ 671
             A++L+FELAA+ RDEI  L+++
Sbjct: 665 AAARDLQFELAARFRDEIADLKRE 688