Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 1234 a.a., Probable transcription-repair coupling factor Mfd (TRCF) from Mycobacterium tuberculosis H37Rv

 Score = 57.8 bits (138), Expect = 3e-12
 Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 100 AYVPTTDTFIEKDASVNAHIEQMRLSATKALLERKDA-------VIVASVSAIYGLGDPD 152
           A +P+ +T   +  S        RL A + L    DA       V+V SV ++     P 
Sbjct: 88  ALLPSWETLPHERLSPGVDTVGTRLMALRRLAHPDDAQLGPPLGVVVTSVRSLLQPMTPQ 147

Query: 153 SYLKMMLHLRRGDVINQRDMLRRLAELQYSRNDMAFERGQFRVRGEVIDIFPAESDQEAV 212
             +   L L  GD      ++ RL EL Y+R DM   RG+F VRG ++DIF A + +  V
Sbjct: 148 LGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIF-APTAEHPV 206

Query: 213 RVEMFDDEIECISLF 227
           RVE + DEI  + +F
Sbjct: 207 RVEFWGDEITEMRMF 221