Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 522/677 (77%), Positives = 592/677 (87%), Gaps = 7/677 (1%)

Query: 1   MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT 60
           MSK F+L S ++P+GDQP AI++L EGLE GLAHQTLLGVTGSGKTFT+ANVIA  QRPT
Sbjct: 1   MSKPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60

Query: 61  IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE 120
           ++LAPNKTLAAQLYGEMK FFP NAVEYFVSYYDYYQPEAYVP++DTFIEKDASVN HIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ 180
           QMRLSATKALLER+D V+VASVSAIYGLGDPD YLKMMLHL  G +I+QR +LRRLAELQ
Sbjct: 121 QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ 180

Query: 181 YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA 240
           Y+RND AF+RG FRVRGEVIDIFPAESD  A+RVE+FD+E+E +SLFDPLTG I S  + 
Sbjct: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIEST-IP 239

Query: 241 RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE 300
           RFT+YPKTHYVTPRERI++A+E+IK EL  RR+ LL+NNKLLEEQR+SQRTQFD+EMMNE
Sbjct: 240 RFTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNE 299

Query: 301 LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE 360
           LG+CSGIENYSRYLSGR  GEPPPTLFDYLP DGLL+IDESHVT+PQIG M++GDR+RKE
Sbjct: 300 LGYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKE 359

Query: 361 TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL 420
           TLVE+GFRLPSALDNRP+KF+EFEALAPQTI+VSATP  YEL KSG EV +QVVRPTGLL
Sbjct: 360 TLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLL 419

Query: 421 DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480
           DPIIEVRPV TQVDDLLSE R+R A +ER+LVTTLTKRMAEDLTEYL EHG +VRYLHSD
Sbjct: 420 DPIIEVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSD 479

Query: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540
           IDTVER+EIIRDLRLG FDVLVGINLLREGLDMPEV+LVAILDADKEGFLRSERSLIQT+
Sbjct: 480 IDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 539

Query: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL 600
           GRAARN+NGKAILY D IT SM KAI ETERRREKQ AYNE+ GI PQ L + V DI+ L
Sbjct: 540 GRAARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILAL 599

Query: 601 G-DIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAA 659
           G +IAK++ +   K    + V  ++ A   LTP+ L+++I +LE  M QHAQNLEFE AA
Sbjct: 600 GQNIAKTKTKGRGK--SRSPVEADTVA---LTPKALQQKIHELEGQMMQHAQNLEFEEAA 654

Query: 660 QKRDEIHQLRQQFIANS 676
           Q RD++HQLR+ FIA S
Sbjct: 655 QIRDQLHQLRELFIAAS 671