Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., UvrABC system protein B from Enterobacter sp. TBS_079

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 523/677 (77%), Positives = 590/677 (87%), Gaps = 7/677 (1%)

Query: 1   MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT 60
           MSK F+L S ++P+GDQP AI++L EGLE GLAHQTLLGVTGSGKTFT+ANVIA  QRPT
Sbjct: 1   MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60

Query: 61  IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE 120
           ++LAPNKTLAAQLYGEMK FFP+NAVEYFVSYYDYYQPEAYVP++DTFIEKDASVN HIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ 180
           QMRLSATKALLER+D V+VASVSAIYGLGDPD YLKMMLHL +G +I+QR +LRRL ELQ
Sbjct: 121 QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLTELQ 180

Query: 181 YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA 240
           Y+RND AF+RG FRVRGEVIDIFPAESD  A+RVE+FD+E+E +SLFDPLTG + S  + 
Sbjct: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVESV-VQ 239

Query: 241 RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE 300
           R+TIYPKTHYVTPRERI++A+E+IK EL  RR+ LL NNKLLEEQR+SQRTQFD+EMMNE
Sbjct: 240 RYTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNE 299

Query: 301 LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE 360
           LG+CSGIENYSR+LSGR  GEPPPTLFDYLP DGLL+IDESHVT+PQIG M++GDR+RKE
Sbjct: 300 LGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKE 359

Query: 361 TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL 420
           TLVE+GFRLPSALDNRP+KF+EFEALAPQTI+VSATP  YEL KSG EV +QVVRPTGLL
Sbjct: 360 TLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLL 419

Query: 421 DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480
           DPIIEVRPVATQVDDLLSE RIRAA +ER+LVTTLTKRMAEDLTEYL EHG +VRYLHSD
Sbjct: 420 DPIIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSD 479

Query: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540
           IDTVER+EIIRDLRLG FDVLVGINLLREGLDMPEV+LVAILDADKEGFLRSERSLIQT+
Sbjct: 480 IDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 539

Query: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL 600
           GRAARNVNGKAILY D IT SM KAI ETERRREKQ  YNE+ GITPQ L + V DI+ L
Sbjct: 540 GRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILAL 599

Query: 601 G-DIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAA 659
           G +IAK++ +   K      V E       LTP+ L+++I +LE  M QHAQNLEFE AA
Sbjct: 600 GQNIAKTKAKGRGKA---RSVVEPDTV--ELTPKALQQKIHELEGQMMQHAQNLEFEEAA 654

Query: 660 QKRDEIHQLRQQFIANS 676
           Q RD++HQLR  FIA S
Sbjct: 655 QIRDQLHQLRDLFIAAS 671