Pairwise Alignments

Query, 193 a.a., electron transport complex subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (409), Expect = 5e-45
 Identities = 82/200 (41%), Positives = 123/200 (61%), Gaps = 10/200 (5%)

Query: 1   MTEYLLLLIGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAYLVE 60
           M  Y+ LLI +V + N  L  FLG+C F+ VSKK+ TA+G+G+A   VLT++     ++ 
Sbjct: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60

Query: 61  SYVLRP----------LGIEYLRTMSFILVIAVVVQFTEMVVHKTSPTLYRLLGIFLPLI 110
             +L P            + +L+ ++FI VIA +VQ  EM + K  P LY  LGIFLPLI
Sbjct: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120

Query: 111 TTNCAVLGVALLNINENHNFIQSIIYGFGAAVGFSLVLILFASMRERIHVADVPAPFKGA 170
           T NCA+ G     +  ++   +S+++GFG+ VG++L ++L A +RE++  ADVP   +G 
Sbjct: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL 180

Query: 171 SIAMITAGLMSLAFMGFTGL 190
            I  ITAGLM+L FM F+G+
Sbjct: 181 GITFITAGLMALGFMSFSGV 200