Pairwise Alignments

Query, 193 a.a., electron transport complex subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Na+-translocating NADH-quinone reductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  151 bits (381), Expect = 9e-42
 Identities = 81/206 (39%), Positives = 127/206 (61%), Gaps = 16/206 (7%)

Query: 1   MTEYLLLLIGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAYLVE 60
           M   L L + ++ V+N +   FLG+C ++ VSK ++TA+G+G+A TFVL +     YL++
Sbjct: 1   MEHLLSLFVRSIFVDNMIFAFFLGMCSYLAVSKNVKTAVGLGIAVTFVLLVTLPVNYLLQ 60

Query: 61  SYVLRP------LGIEYLRTMSFILVIAVVVQFTEMVVHKTSPTLYRLLGIFLPLITTNC 114
           + VL        + + +L  + FI VIA +VQ  EMVV + SP+LY  LGIFLPLI  NC
Sbjct: 61  TKVLAANAIIEGVDLSFLSFILFIAVIAGIVQLVEMVVERFSPSLYASLGIFLPLIAVNC 120

Query: 115 AVLGVAL-----LNINENH-----NFIQSIIYGFGAAVGFSLVLILFASMRERIHVADVP 164
           A++G +L     +N+  +      +   ++ Y  G+ +G+ L ++  A++RE++  +DVP
Sbjct: 121 AIMGASLFMQQRINLGASDPKYIGDVWDALSYALGSGIGWLLAIVGLAAIREKMAYSDVP 180

Query: 165 APFKGASIAMITAGLMSLAFMGFTGL 190
           AP KG  I  IT GLM++AFM F+GL
Sbjct: 181 APLKGLGITFITVGLMAIAFMCFSGL 206