Pairwise Alignments

Query, 193 a.a., electron transport complex subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 90.9 bits (224), Expect = 1e-23
 Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 6/150 (4%)

Query: 7   LLIGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAYLVESYVLRP 66
           +++  ++  N + V  LG+CP +G +      +GMGLAT FVL    +C+ +V S + + 
Sbjct: 6   VMMNGIIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVL----ICSNVVISSI-KN 60

Query: 67  LGIEYLRTMSFILVIAVVVQFTEMVVHKTSPTLYRLLGIFLPLITTNCAVLGVALLNINE 126
           L  + +R  SFI+VIA  V   +M++    P LY  LG+F+PLI  NC VLG A     +
Sbjct: 61  LIPDMVRIPSFIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRAEAFAAK 120

Query: 127 NHNFIQSIIYGFGAAVGFSLVLILFASMRE 156
           N N + S+  G G   GF++ L L  ++RE
Sbjct: 121 N-NPLASMFDGIGMGFGFTIALTLLGAVRE 149