Pairwise Alignments

Query, 195 a.a., electron transport complex subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., ferredoxin-type protein NapF (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 115 IGCTKCIQACPVDAI----VGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPVQTTPE 169
           I C  C  AC V AI      G      ++ + CTGC  CVAPCP D I MI  QTTP+
Sbjct: 107 IWCQSCKDACDVSAIRFTPTLGRAPTPELLLDACTGCGACVAPCPADAIVMIKPQTTPQ 165



 Score = 35.0 bits (79), Expect = 7e-07
 Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 112 DMCIGCTKCIQACPVDAIVGGNKAVHTV--IKNECTGCDLCVAPCPTDCIEMIPVQTTPE 169
           D+C  C  CI  C    IV G      V     ECT C  C   CP       P+ +  +
Sbjct: 34  DLCSRCGDCITVCETKIIVKGEAGFPEVRFDNAECTFCGECAKVCPE------PIFSLDK 87

Query: 170 SWKWQLNA 177
           S  W L A
Sbjct: 88  SPPWTLEA 95



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 11/19 (57%), Positives = 12/19 (63%)

Query: 112 DMCIGCTKCIQACPVDAIV 130
           D C GC  C+  CP DAIV
Sbjct: 138 DACTGCGACVAPCPADAIV 156