Pairwise Alignments

Query, 195 a.a., electron transport complex subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 109 IHEDMCIGCTKCIQACPVDAIV-GGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIP 163
           ++ D C  C  C+  CP  A+  GG K     ++  C  C LC + CP   I + P
Sbjct: 423 VNTDNCTLCLSCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVISLTP 478



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 110 HEDMCIGCTKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEM-IPVQTTP 168
           H +   GC++C+  CP DAI   +  +  +    C G   C   CPT  I   +P   TP
Sbjct: 193 HRNGIDGCSRCLNFCPADAIASVDHKIE-IDPYLCHGAGSCTNACPTGAISYDLP---TP 248

Query: 169 ESWKWQLNAIPVVNVTDSAPAAQ 191
           ++    LN +    VT    AAQ
Sbjct: 249 QALHSYLNKL----VTRFRSAAQ 267



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 122 QACPVDAIVGGNKAVH---TVIKNECTGCDLCVAPCPTDCI 159
           QA   DA +  +   +   +V  + CT C  CV+ CPT  +
Sbjct: 403 QAASTDACLSKSNIPYGKVSVNTDNCTLCLSCVSTCPTQAL 443



 Score = 23.9 bits (50), Expect = 0.006
 Identities = 10/30 (33%), Positives = 12/30 (40%)

Query: 100 DNKVKMVAFIHEDMCIGCTKCIQACPVDAI 129
           D   K   +  E  C+ C  C  ACP   I
Sbjct: 445 DGGEKPALYFVEQACVQCGLCESACPEKVI 474