Pairwise Alignments

Query, 195 a.a., electron transport complex subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 67  GDAINKCPPGGQATIEKLADLMGVEVQDSAHDLDNKVKMV-AFIHEDMCIGCTKCIQACP 125
           G+ +  CP      +E     MG   +++   L N  K++   I E++C+ C  C  ACP
Sbjct: 88  GNCVESCPTN---VLE-----MGTLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACP 139

Query: 126 VDAIVGGNKAVHTVIKNECTGCDLCVAPCPTD 157
           VDAI   N  ++ +  N C  C  C+  CP +
Sbjct: 140 VDAISHNNTGLYEIDVNICVSCKNCLKVCPVE 171



 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 25/152 (16%)

Query: 29  FKVEADPIVDQIDAILPQT--QCGQCG--YPGC-----RPYAEAIANGDAINKCPPGGQA 79
           FK E+D ++ +I  I+P     CG C    PG            I +G  +  CP     
Sbjct: 203 FKEESD-VIAEIPRIVPSLCIGCGNCVDVCPGSIDLERLKVTSCIKSGKCLEVCPT---- 257

Query: 80  TIEKLADLMGVEVQDSAHDLDNKVKMVAFIHEDMCIGCTKCIQACPVDAIVGGNKAVHTV 139
                A  +GV  +     +  +      + E+ CIGC  C +AC V   +  +K  +  
Sbjct: 258 ----TAIRIGVPEK-----ITKRTAECYIVDEEKCIGCRICYRACNVPEAILISKETNLP 308

Query: 140 IKNE--CTGCDLCVAPCPTDCIEMIPVQTTPE 169
             N   C  C LC   CP D I+ +  +T+ +
Sbjct: 309 YINPEYCVRCGLCQNACPVDAIDYLKTETSED 340



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 106 VAFIHEDMCIGCTKCIQACPVDAI-----VGGNKAVHTVIKNECTGCDLCVAPCPTDCIE 160
           V F   + CI C+ C ++CP DAI         K +       C  C  CV  CPT+ +E
Sbjct: 41  VIFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLE 100

Query: 161 MIPVQTTPESWKWQLNAI 178
           M  ++   +   W +  I
Sbjct: 101 MGTLRKEAKELLWNVPKI 118