Pairwise Alignments
Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056
Subject, 892 a.a., electron transport complex, RnfABCDGE type, C subunit from Pseudomonas stutzeri RCH2
Score = 584 bits (1506), Expect = e-171
Identities = 350/812 (43%), Positives = 469/812 (57%), Gaps = 85/812 (10%)
Query: 39 KLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVKVGDRVLKGQPL 98
K+WD GGIHP E+K SNR PI A +P L+LPL QH+G + V +G+RVLKGQ +
Sbjct: 5 KIWDIHGGIHPPEHKDLSNRTPIQPAPLPQRLILPLAQHLGAPAEPCVTLGERVLKGQQI 64
Query: 99 TQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWFELQPQPDFQQL 158
+ P+HAPTSGV+S I P+ H SG+ IV+ D +++W ELQPQPD+++L
Sbjct: 65 AVASGFVSAPLHAPTSGVVSLIGPQPYPHVSGMLANAIVIDSDGEDKWIELQPQPDYREL 124
Query: 159 TPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRT-EILIINAAECEPYITADDVLMRQY 217
LLELIRQAGISG+GGAGFPTA KL ++T LIIN ECEPYITADD+LMR+
Sbjct: 125 ERPALLELIRQAGISGLGGAGFPTAVKLSPPPTQTIRTLIINGTECEPYITADDLLMREK 184
Query: 218 AHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMVIRVIPTKYPSGGEKQ 277
A +++ GIEI+ H+++P+ +IGIEDNKPEA+AA++ A ++P V++V PTKYPSGGEKQ
Sbjct: 185 AAQLVAGIEILAHLIQPQEVLIGIEDNKPEAIAAVRAAIGERPFVLKVFPTKYPSGGEKQ 244
Query: 278 LIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRRVVTLTGDCFRKPRNV 337
LI+ILT EVP GG+PADIG++ QNVG+ AI A++ G+PLI R+ TLTG+ +P NV
Sbjct: 245 LIQILTGEEVPSGGLPADIGMLCQNVGTCVAIHDAVLLGKPLISRITTLTGEALARPMNV 304
Query: 338 WALLGTPVQALLNEFGYKADKKLPRLIMGGPMMGFTLPHAQVPITKTANCILAPTRNELT 397
L+GT V LL F +L RLIMGGPMMGFTLP +VP+ KT NC+LA EL
Sbjct: 305 EVLIGTAVDELL-AFAGLEQNRLNRLIMGGPMMGFTLPSLEVPVVKTTNCLLASALEELP 363
Query: 398 SSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELDLKDCIECGACAYVCPSE 457
+ CIRCG+CAEACPVSLLPQQL + A +E ++ + L DCIECGACAYVCPS
Sbjct: 364 PPPPALPCIRCGECAEACPVSLLPQQLHFFALGQEHEQLKAHHLFDCIECGACAYVCPSS 423
Query: 458 IPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKAERENRFKQAAE--DRRK 515
IPLVQYYR AK EIR + + AE +K RFE ++ R+ R + ++E K AE R K
Sbjct: 424 IPLVQYYRAAKGEIRELEQKQQKAEHSKQRFELRQERLRRAEEQKEAERKARAERAARAK 483
Query: 516 EMQQQGGSDAIAAAIERVKAQKAQLEPTDNSVKPAIAAAIARAKAKQAE-------AAQS 568
Q + G+ I A V+AQKA L +K I A++A+ K+AE A+
Sbjct: 484 AAQSEAGAATITTAAP-VQAQKAGLSDAQKKLK--IEASMAQVALKKAEKQLAAHDTAEL 540
Query: 569 GASEPDNSEMAKLREERKRQARERKAQKGEVTEASTSDGADDKKSAVAAAIARAKARKAE 628
A D + A+ + A + A + D KK+ + AA+ +A+ RK E
Sbjct: 541 QAQVADLRKAAEAAQNALDAAMQESASTASAPATTPVDEEALKKAKIEAAMLKAQIRKLE 600
Query: 629 QQETE----------------------SAAQ---PAQATPSSDDADPKKAAVAAAIARAK 663
+ ET +AAQ PA A +DD KKA + AA+ +A+
Sbjct: 601 KVETPDDDQQAELARLRQQLHEAEQALTAAQDATPAPAAKPADDEALKKAKIEAAMLKAQ 660
Query: 664 ARKAEQQE-------------------------TESTAQPAQATPSSDDADPKKAAVAAA 698
RK E+ E +A PA A + D KKA + AA
Sbjct: 661 IRKLEKVEAPDDDQQAELARLRQQLHEAEQALAAAQSAAPAPAAKRAADETLKKAKIEAA 720
Query: 699 IARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIARAKARKAEQQETESAAQ- 757
+ +A+ RK EK E +P D A +AR + + E ++ +AAQ
Sbjct: 721 MLKAQIRKLEKLE----------SPDDDQ--------QAELARLRQQLHEAEQALAAAQS 762
Query: 758 --PTQATPSSDDADPKKAAVAAAIARAKARKA 787
P A +DD KKA + A+ RA+ +KA
Sbjct: 763 AAPAPAAKPADDEALKKAKIELAMKRAELKKA 794
Score = 45.8 bits (107), Expect = 1e-08
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 479 EAAERAKARFEEKKARMERDKAERENRFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKA 538
E ++AK KA++ + + Q AE R Q A+AAA A A
Sbjct: 710 ETLKKAKIEAAMLKAQIRKLEKLESPDDDQQAELARLRQQLHEAEQALAAAQSAAPAPAA 769
Query: 539 QLEPTDNSVKPAIAAAIARAKAKQAEAAQSGASEPDNSEMAKLRE-----ERKRQARERK 593
+ + K I A+ RA+ K+AE A GA D +E+++LR+ E+ A E
Sbjct: 770 KPADDEALKKAKIELAMKRAELKKAEKA--GA---DEAELSRLRDALAAAEQALHAAEDA 824
Query: 594 AQKGEVTEASTS-DGADDKKSAVAA--AIARAKARKAEQQE-TESAAQPAQATPSSD 646
+QK TS G DD++ + A ARA RK E+ E E A A T S+
Sbjct: 825 SQKPAPELVRTSKPGVDDRQRELKTELAFARADLRKLERDENAEPGAVEAARTRLSE 881