Pairwise Alignments

Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Na(+)-translocating NADH-quinone reductase subunit A (RefSeq) from Shewanella amazonensis SB2B

 Score = 69.3 bits (168), Expect = 4e-16
 Identities = 100/450 (22%), Positives = 180/450 (40%), Gaps = 70/450 (15%)

Query: 58  RQPIINASIPNELVLPLKQHIGKAGDLLVKVGDRVLKGQPLTQYTSTFMLPIHAPTSGVI 117
           RQ I  A+ P++L L  K+++G    +LV+ G+RV+KGQ L +  S   +   AP +G++
Sbjct: 24  RQEIDIAAKPSQLALLGKEYVGLKPSMLVEEGERVIKGQALFEDKSNPGVRFTAPCAGIV 83

Query: 118 SAIEPRTVAHPSGLSELCIVLTPDQQEEWFELQPQPDFQQLTPETLLELIRQAGI-SGMG 176
           SAI             L +V+  D  +E  +   + +   L+ E + + + Q+G+ + + 
Sbjct: 84  SAIH-----RGDKRLLLSVVIDCDGSDESIDFGVEANLAALSREQVQDKLLQSGLWTALR 138

Query: 177 GAGFPTAKKLQSGLSRTEILIINAAECEPYITADDVLMRQYAHEIIQGIEIVEHILKPKL 236
              F  A K  S  +    L + A +  P      +++         G++++ H+    +
Sbjct: 139 TRPFSRAPKPGSAPAG---LFVTAVDTNPLAADPRIIINTDVDAFAAGMQVLTHLTDGPV 195

Query: 237 TIIGIEDNKPEAVAALQQAAQDKPMVIRVIPTKYPSGGEKQLIKILTNLEVPKGGIPADI 296
            +   +D   E    L   A+   +        +P+G     I +L         +P  +
Sbjct: 196 FL--CQDGNHE----LLPGAELPRVQTHRFQGVHPAGLVGTHIHML---------MPVSM 240

Query: 297 GLMVQNVG--SLQAIARAIVHGEPLIRRVVTLTGDCFRKPRNVWALLGTPVQALLNEFGY 354
              V ++G   + A+ R    G+   RR+V+L G    KPR +  +LG  V  L+   G 
Sbjct: 241 ERQVWHIGYQDVMAVGRLFTTGQLDNRRIVSLAGPNVLKPRLIATVLGAKVSDLVK--GE 298

Query: 355 KADKKLPRLIMGGPMMGFTLP---------HAQV----------------------PITK 383
             D+   R++ G  + G T           H Q+                       IT+
Sbjct: 299 LKDEVHSRVVSGSVLSGHTARGAFDFLGRFHPQISVVTEDDSEQFLPWVRLGRDKFSITR 358

Query: 384 TANCILAPTR-NELTSSDN--EMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCE--- 437
           T      P +  ++T+     + A +  GQ     P+ +LP  L       + D+ +   
Sbjct: 359 TVLSRFLPKKLYDMTTHTGGAKRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQLLG 418

Query: 438 --ELDLKDCIECGACAYVCPSEIPLVQYYR 465
             ELD +D      C +VCPS+    Q  R
Sbjct: 419 ALELDEED---LALCTFVCPSKYDFGQELR 445