Pairwise Alignments

Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  595 bits (1533), Expect = e-174
 Identities = 363/807 (44%), Positives = 472/807 (58%), Gaps = 110/807 (13%)

Query: 28  MLSLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVK 87
           ML+L++Q+  G LW  PGGIHP E K  SN  PI    +  E ++P+ Q +G+   L VK
Sbjct: 1   MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNTTPISQLPLAREYLVPVPQ-VGENCTLAVK 59

Query: 88  VGDRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWF 147
           VGD+VLKG PLTQ TS + LP+HAPTSG + AIE R   H S L     V+  D ++ W 
Sbjct: 60  VGDKVLKGTPLTQGTSIWHLPVHAPTSGAVVAIELRASNHASALPVNTCVIAADGEDRWC 119

Query: 148 ELQPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYI 207
           EL        L+ + ++  I  AGI+GMGGA FP+  KL   +S  E++IIN  ECEPYI
Sbjct: 120 ELT-SGSLDSLSNQQIITKIHAAGIAGMGGAAFPSHIKLNP-VSEIELVIINGVECEPYI 177

Query: 208 TADDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMV----- 262
           +ADD LMR+Y+ EI+ GI I+  +L PK  +I IEDNKPEA+ A+Q A     +      
Sbjct: 178 SADDRLMREYSQEILAGIGIIHRLLAPKRIVIAIEDNKPEAIQAMQNAVSQSTLPTGSVR 237

Query: 263 IRVIPTKYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRR 322
           + VIPTKYPSGGEKQLI+I+T  EVP G IPA +G++V NVG+  AI +A+  G+PLI R
Sbjct: 238 VTVIPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAFAIHQAVTQGKPLIER 297

Query: 323 VVTLTGDCFRKPRNVWALLGTPVQALL--NEFGYKADKKLPRLIMGGPMMGFTLPHAQVP 380
           VVT+TG    KP N W  +GTPV+ +L   EF   AD+K+   I+GGPMMG  LP  QVP
Sbjct: 298 VVTVTGQNVGKPGNYWLPIGTPVEHVLAHTEFNAAADQKV---IIGGPMMGHALPTIQVP 354

Query: 381 ITKTANCILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELD 440
           I K  NCIL P+  E+ ++  E ACIRCG+CA ACP  LLPQQL WHAKAEE+DK    +
Sbjct: 355 ILKGTNCILVPSSQEIGTTPEEKACIRCGECANACPALLLPQQLFWHAKAEEYDKAASYN 414

Query: 441 LKDCIECGACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKA 500
           LKDCIECG C+YVCPS+IPLV+YYR AK+ ++  + E + AERAK RFE +  R+E +K 
Sbjct: 415 LKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQTADEKQQAERAKLRFEARLQRLEEEKL 474

Query: 501 ERENRFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQLEPTDNSV------------- 547
            RE + K+AA  RR+        DA+A A+ R+ A+KA     D++              
Sbjct: 475 AREAKAKEAAA-RRQTTMTTTDKDAVAQAMARIAAKKAAQTTADDATATIATAEVDAVST 533

Query: 548 -----KPAIAAAIARAKAKQAEAAQSGASEPDNSEMAKLREERKRQARERKAQKGEVTEA 602
                K A+AAAIARAKAK+A A     +E D        E  K+ A   +A+       
Sbjct: 534 QAPKGKAAVAAAIARAKAKKAAATNVSQAEDD-------AESSKQTAPTEQAE------- 579

Query: 603 STSDGADDKKSAVAAAIARAKARKAEQQETESAAQ-----------PAQATPSSDDADPK 651
                +  +K  VAAAIARAKA+KA       A +           P   + ++ + D K
Sbjct: 580 -----SLSQKDKVAAAIARAKAKKAAMNADSDANEGTDTAEINSDKPVIPSAANTEMDDK 634

Query: 652 KAAVAAAIARAKARKAEQQETES-------------TAQPAQAT--------PSS----- 685
           KA VAAA+ARAKA+KA  Q+TES             +AQP+ AT        P+S     
Sbjct: 635 KAKVAAAVARAKAKKAAAQQTESNDAAEVQSSDVAESAQPSNATLKPELNSEPNSAPNST 694

Query: 686 -DDADPKKAAVAAAIARAKARKAEKQETE----------SAAQPTQATPSS--------- 725
               D KKA VAAA+ARAKA+KA  Q+ E            A+P  A PS+         
Sbjct: 695 LSPEDEKKAKVAAAVARAKAKKAAAQQVELNEDIPAQPIVGAEPVSAQPSNAPLSPELSA 754

Query: 726 --DDADPKKAAVAAAIARAKARKAEQQ 750
                D KKA VAAA+ARAKA+KA ++
Sbjct: 755 QLSPEDEKKAKVAAAVARAKAKKAARE 781