Pairwise Alignments

Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., electron transport complex subunit RsxC from Klebsiella michiganensis M5al

 Score =  667 bits (1721), Expect = 0.0
 Identities = 373/730 (51%), Positives = 475/730 (65%), Gaps = 56/730 (7%)

Query: 28  MLSLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVK 87
           M  L    +  K+WDF GGIHP E K QSN  P+   S+P   V+PLKQHIG  G+L V+
Sbjct: 1   MFKLFSAFRKDKVWDFNGGIHPPEMKIQSNGTPLRQVSLPQRFVIPLKQHIGAEGELCVQ 60

Query: 88  VGDRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWF 147
            GDRVL+GQPLT+     MLP+HAPTSG+++AI P + AHPS L+E+ +++  D ++ W 
Sbjct: 61  PGDRVLRGQPLTRGWGR-MLPVHAPTSGIVAAIAPHSTAHPSALAEMSVIIDADGEDRWI 119

Query: 148 ELQPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYI 207
           E     D+Q  + E L+E I Q G++G+GGAGFPT  KL+ G  + + LIINAAECEPYI
Sbjct: 120 ERDGWYDYQNKSREALIERIHQFGVAGLGGAGFPTGAKLRGGGDKIDTLIINAAECEPYI 179

Query: 208 TADDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMV-IRVI 266
           TADD LM+  A +I++GI I+ HIL+P   +IGIEDNKP+A++ L+    D   + +RVI
Sbjct: 180 TADDRLMQDCAAQIVEGIRILAHILQPGQVLIGIEDNKPQAISMLRAVLADTHGISLRVI 239

Query: 267 PTKYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRRVVTL 326
           PTKYPSGG KQL +ILT  +VP GG  +DIG+++QNVG+  A+ RA++ GEPL  RVVTL
Sbjct: 240 PTKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPLTERVVTL 299

Query: 327 TGDCFRKPRNVWALLGTPVQALLNEFGY--KADKKLPRLIMGGPMMGFTLPHAQVPITKT 384
           TG+   +P NVWA LGTPV  LL + G+   AD   P +IMGGP+MGFTLP   VP+ K 
Sbjct: 300 TGEAVSRPGNVWARLGTPVSHLLKDAGFCPSAD---PMVIMGGPLMGFTLPWLDVPVVKI 356

Query: 385 ANCILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELDLKDC 444
            NC+LAP+ +E+   + E  CIRC  CA+ACP  LLPQQL W +K ++ DK    +L DC
Sbjct: 357 TNCLLAPSASEMGEPEEEKGCIRCSACADACPADLLPQQLYWFSKGQQHDKATSHNLADC 416

Query: 445 IECGACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKAEREN 504
           IECGACA+VCPS IPLVQY+RQ KAEI   + E + A  AK RFE ++AR+ERDKA R  
Sbjct: 417 IECGACAWVCPSNIPLVQYFRQEKAEISAIAQEEKRAAEAKIRFEARQARLERDKAARLE 476

Query: 505 RFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQLEPTDNSVKPAIAAAIARAKAKQAE 564
           R KQAA        Q    D                       + AI AA+AR + KQ +
Sbjct: 477 RHKQAA-------VQPAAKD-----------------------QDAINAALARVREKQRD 506

Query: 565 AAQS----GASEPDNSEMAKLREERKRQARERKAQKGEVTEASTSDGADDKKSAVAAAIA 620
           AAQ        +PDNSE    RE RK +AR RKA+  + T  +    AD +K+AV AAIA
Sbjct: 507 AAQPIIVLSGVKPDNSEAIAAREARKAEARARKAE--QQTAPAVDAAADPRKAAVEAAIA 564

Query: 621 RAKARKAEQQETESAAQPAQATPSSDDADPKKAAVAAAIARAKARKAEQQETESTAQPAQ 680
           RAKARKAEQQ T  A   A   P++  ADP+KAAV AAIARAKARKAEQQ T      A 
Sbjct: 565 RAKARKAEQQ-TAPAVDAAAGQPAA--ADPRKAAVEAAIARAKARKAEQQ-TAPAVDAAA 620

Query: 681 ATPSSDDADPKKAAVAAAIARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIA 740
             P++  ADP++AAV AAIARAKARKAE+Q+           PS+ + D +KAAVA AIA
Sbjct: 621 EQPAA--ADPRRAAVEAAIARAKARKAEQQQ-------QAVPPSAANDDARKAAVAEAIA 671

Query: 741 RAKARKAEQQ 750
           R +ARKA +Q
Sbjct: 672 RVQARKASRQ 681



 Score = 95.5 bits (236), Expect = 9e-24
 Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 26/201 (12%)

Query: 601 EASTSDGADDKKSAVAAAIARAKARKAEQQETESAA----QPAQATPSSDDADPKKAAVA 656
           +A  S  A ++K A  A I R +AR+A  +  ++A     + A   P++ D D    A+ 
Sbjct: 440 KAEISAIAQEEKRAAEAKI-RFEARQARLERDKAARLERHKQAAVQPAAKDQD----AIN 494

Query: 657 AAIARAKARKAEQQETESTAQPAQATPSSDDADPKKAAVAAAIARAKARKAEKQETESAA 716
           AA+AR + ++ +       AQP             K   + AIA  +ARKAE +  ++  
Sbjct: 495 AALARVREKQRD------AAQPIIVLSGV------KPDNSEAIAAREARKAEARARKAEQ 542

Query: 717 QPTQATPSSDDADPKKAAVAAAIARAKARKAEQQETESAAQPTQATPSSDDADPKKAAVA 776
           Q   A  ++  ADP+KAAV AAIARAKARKAEQQ T  A       P++  ADP+KAAV 
Sbjct: 543 QTAPAVDAA--ADPRKAAVEAAIARAKARKAEQQ-TAPAVDAAAGQPAA--ADPRKAAVE 597

Query: 777 AAIARAKARKAAQQSSSNLNA 797
           AAIARAKARKA QQ++  ++A
Sbjct: 598 AAIARAKARKAEQQTAPAVDA 618