Pairwise Alignments

Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., electron transport complex protein RnfC (RefSeq) from Shewanella sp. ANA-3

 Score =  615 bits (1587), Expect = e-180
 Identities = 379/825 (45%), Positives = 501/825 (60%), Gaps = 90/825 (10%)

Query: 28  MLSLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVK 87
           ML+L++Q+  G LW  PGGIHP E K  SN  PI    +  E ++P+ Q +G+   L VK
Sbjct: 1   MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNTTPISQLPLAQEYLVPVPQ-VGENCTLAVK 59

Query: 88  VGDRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWF 147
           VGD+VLKG PLTQ TS + LP+HAPTSG +  IEPR   H S L     V+  D ++ W 
Sbjct: 60  VGDKVLKGAPLTQGTSIWHLPVHAPTSGTVVTIEPRASNHASALPVNTCVIAADGEDRWC 119

Query: 148 ELQPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYI 207
           EL P     +L+   ++  I  AGI+GMGGA FP+  KL   +S  E++IIN  ECEPYI
Sbjct: 120 ELTPGSI--ELSNHEMIAKIHGAGIAGMGGAAFPSHIKLNP-VSEIELVIINGVECEPYI 176

Query: 208 TADDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMV----- 262
           +ADD LMR+Y+ +I+ GI I+  +L PK  +I IEDNKPEA+ A+QQA     +      
Sbjct: 177 SADDRLMREYSQDILAGIGIIHRLLAPKRIVIAIEDNKPEAIKAMQQAVSQSALPAGSTR 236

Query: 263 IRVIPTKYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRR 322
           +  IPTKYPSGGEKQLI+I+T  EVP G IPA +G++V NVG+  AI +A+  G+PLI R
Sbjct: 237 VTAIPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAFAIHQAVTQGKPLIER 296

Query: 323 VVTLTGDCFRKPRNVWALLGTPVQALLN--EFGYKADKKLPRLIMGGPMMGFTLPHAQVP 380
           VVT+TG    KP N W  +GTPV+ +L   EF  +AD+K+   I+GGPMMG  LP  QVP
Sbjct: 297 VVTVTGQNVGKPGNYWLPIGTPVEHVLKYTEFNAEADQKV---IIGGPMMGHALPTIQVP 353

Query: 381 ITKTANCILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELD 440
           I K  NCIL P+  E+ ++  E ACIRCG+CA ACP  LLPQQL WHAKAEE+DK    +
Sbjct: 354 ILKGTNCILVPSSQEIGTTPEEKACIRCGECANACPALLLPQQLFWHAKAEEYDKAASYN 413

Query: 441 LKDCIECGACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKA 500
           LKDCIECG C+YVCPS+IPLV+YYR AK+ ++  + E   AERAK RFE +  R+E +K 
Sbjct: 414 LKDCIECGCCSYVCPSDIPLVEYYRIAKSALKQAADEKHQAERAKQRFEARIQRLEEEKL 473

Query: 501 ERENRFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQLEPT--DNSV----------- 547
            RE + K+AA  RR+        +A+A A+ R+ A+KA    T  DN+            
Sbjct: 474 AREAKAKEAAA-RRQATMTSTDKNAVAEAMARIAAKKAAAAETTADNAPVEVVAADASST 532

Query: 548 -----KPAIAAAIARAKAKQAEAAQSGASEPDNSEMAKLREERKRQARERKAQKGEVTEA 602
                K A+AAAIARAKAK+A AAQ GA + ++S+ A   E+             E TE 
Sbjct: 533 EAPKGKAAVAAAIARAKAKKAAAAQ-GADDAESSQQAVSPEQ------------SEPTEQ 579

Query: 603 STSDGADDKKSAVAAAIARAKARKA-------EQQETESAA----QPAQATPSSDDADPK 651
           + S    DK   VAAAIARAKA+KA          +T++A     + A  T ++ +AD K
Sbjct: 580 TESLSQKDK---VAAAIARAKAKKAALKADSDANSDTDAATSNTDKSATETTANAEADDK 636

Query: 652 KAAVAAAIARAKARKAEQQETEST----AQP---AQATPSSDDA----------DPKKAA 694
           KA VAAA+ARAKA+KA  Q+ ES+     QP   A A P S+            D KKA 
Sbjct: 637 KAKVAAAVARAKAKKAAAQQAESSEVAEVQPERVADAKPESESGSIPSTPLSPEDEKKAK 696

Query: 695 VAAAIARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIARAKARKAEQQETES 754
           VAAA+ARAKA+KA  Q+ ES          + DA+P           +++      E+ S
Sbjct: 697 VAAAVARAKAKKAATQQAESTEVAEVQPKLAVDAEPD----------SESGSQSGDESSS 746

Query: 755 AAQPTQATPSSDDADPKKAAVAAAIARAKARKAAQQSSSNLNAEE 799
            A+P  + P S + D KKA VAAA+ARAKA+KAA+++++  +A E
Sbjct: 747 VAEP--SAPLSPE-DEKKAKVAAAVARAKAKKAAREANAISDANE 788