Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., electron transport complex, RnfABCDGE type, D subunit from Pseudomonas stutzeri RCH2

 Score =  314 bits (804), Expect = 2e-90
 Identities = 172/352 (48%), Positives = 221/352 (62%), Gaps = 25/352 (7%)

Query: 1   MAFFIASSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAG 60
           MA    +SPH +    T  VM  VLA  LPG++  T+ +G GTLI L  A + A+  EA 
Sbjct: 1   MALPRITSPHAKGPSRTQRVMLLVLAATLPGVVVLTWLYGAGTLINLAWACAAALGFEAA 60

Query: 61  IMLLRKRSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNP 120
           I+ LR+R     LRD S +VTA LLA+A+PP SPWW+ +I    A+V  K LYGGLGQNP
Sbjct: 61  ILRLRQRPVGFFLRDGSVLVTAVLLALALPPYSPWWLTLIATGCAVVFGKQLYGGLGQNP 120

Query: 121 FNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGI 180
           FNPAMI YVV+LISFPV+MT+W  P  +                G  +    +  I +  
Sbjct: 121 FNPAMIGYVVVLISFPVEMTTWPVPHSV----------------GLSAGLQHILGIASLP 164

Query: 181 DGITMATPLDAFKTSLKAGHTMSETLTQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIR 240
           DG T AT LD  K +     T+ E  + P F  F GIG E VN+A+L GGL LL  R+  
Sbjct: 165 DGWTQATALDVLKVNKSL--TIGELWSNPAFGHFGGIGSEVVNLAFLAGGLFLLHKRLFS 222

Query: 241 WHIPMAMLAGLVFTALLAQLFAPG----TTASPMIHLLSGATMLGAFFIATDPVSASTTD 296
           WH P+ ML  L+   L++ +F  G    +  SP+ HLLSGATMLGAFFI TDPVS++T+ 
Sbjct: 223 WHAPVGMLGALL---LMSLVFWNGSGSDSNGSPLFHLLSGATMLGAFFIVTDPVSSATSP 279

Query: 297 KGRLIYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPRTYGH 348
           +GRLI+G  +G +V++IR+WGG+PDGVAF VLL N+  P IDYYT+PRTYGH
Sbjct: 280 RGRLIFGAGVGILVYVIRAWGGYPDGVAFGVLLMNLAAPTIDYYTRPRTYGH 331