Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit from Pseudomonas stutzeri RCH2

 Score =  131 bits (330), Expect = 3e-35
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 46/271 (16%)

Query: 80  VTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQM 139
           VT+ L A+ +PP  P W V +G+ F +VI K ++GG G+N  NPA+ A   L  ++P QM
Sbjct: 155 VTSVLFALILPPTIPLWQVALGISFGVVIGKEIFGGTGKNFLNPALTARAFLFFAYPAQM 214

Query: 140 TS---WMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGIDGITMATPLDAFKTSL 196
           +    W A      +  +   + SL F G    G+    I +GI      T +DAF  ++
Sbjct: 215 SGDAVWTA-----VDGYAGATALSLGFAG----GIE-NVIESGI------TWMDAFVGTI 258

Query: 197 KAGHTMSETLTQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIRWHIPMAMLAGLVFTAL 256
               ++ ET T                +A  +GG+IL+  +I  W I   ++ G++  + 
Sbjct: 259 HG--SIGETST----------------LAIFIGGVILIGSKIASWRIVTGVMLGMIGLST 300

Query: 257 LAQLFAPGTTASPMI------HLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFIGAMV 310
           L  L   G+  +P+       H++ G    G  F+ATDPVSAS T+ G+ ++G  IG MV
Sbjct: 301 LFNLI--GSETNPLFGMPWYWHMVVGGFAFGMIFMATDPVSASMTNTGKWVFGILIGVMV 358

Query: 311 FLIRSWG-GFPDGVAFAVLLANMCVPLIDYY 340
            LIR     FP+G+  A+L AN+C PLID++
Sbjct: 359 VLIRVVNPAFPEGMMLAILFANLCAPLIDHF 389