Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  378 bits (971), Expect = e-109
 Identities = 193/349 (55%), Positives = 246/349 (70%), Gaps = 6/349 (1%)

Query: 1   MAFFIASSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAG 60
           MAF IASSPH+R    T+ VM+ V+  ALPGL  Q YFFG+GT IQ+ +AI+ A+A EA 
Sbjct: 1   MAFKIASSPHVRKDSQTSAVMQRVILAALPGLAVQCYFFGWGTFIQVCVAIATALAAEAL 60

Query: 61  IMLLRKRSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNP 120
           ++ LR R     L D SAV+TA L+ VAIPPL+PW++VVIG +FAIV+ K LYGGLGQN 
Sbjct: 61  VLKLRNRPISPTLMDQSAVLTALLIGVAIPPLAPWYLVVIGTVFAIVMVKQLYGGLGQNL 120

Query: 121 FNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGI 180
           FNPAM AYV+LL+SFPV MT+W AP  L    + ++D+  +IF    +   +L     GI
Sbjct: 121 FNPAMAAYVLLLVSFPVLMTTWAAPSTLAQSSAGILDAIDVIFSAQGAADFAL-----GI 175

Query: 181 DGITMATPLDAFKTSLKAGHTMSETLTQPQF-SGFAGIGWEWVNIAYLLGGLILLKLRII 239
           DG++MATPLD  KT L  G T  E+L +  F  G  G GW WVN+AYL GGL LL  + I
Sbjct: 176 DGVSMATPLDTLKTDLSMGLTADESLKRAIFGGGSTGEGWFWVNLAYLCGGLFLLATKTI 235

Query: 240 RWHIPMAMLAGLVFTALLAQLFAPGTTASPMIHLLSGATMLGAFFIATDPVSASTTDKGR 299
           RWHI   ++  L   +L     +P T ASP+ +L SGATML AFFIATDPV+A+T+ +GR
Sbjct: 236 RWHISGGLIGALFVCSLFGFGASPDTHASPLFNLFSGATMLAAFFIATDPVTAATSPRGR 295

Query: 300 LIYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPRTYGH 348
           L++G  IG +++LIR++GG+PDGVAFAVLLAN+C PLIDYY KPR YGH
Sbjct: 296 LLFGAMIGVLIYLIRTFGGYPDGVAFAVLLANLCAPLIDYYIKPRAYGH 344