Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., electron transport complex, RnfABCDGE type, D subunit (RefSeq) from Shewanella loihica PV-4

 Score =  400 bits (1028), Expect = e-116
 Identities = 199/348 (57%), Positives = 251/348 (72%), Gaps = 2/348 (0%)

Query: 1   MAFFIASSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAG 60
           MAF +ASSPHL +K  T  +M  V+ CALPG +AQ YFFG+GTLIQ+ LAI++AVA EA 
Sbjct: 1   MAFKLASSPHLSTKAQTRGLMFKVMLCALPGALAQCYFFGWGTLIQIALAIAIAVATEAA 60

Query: 61  IMLLRKRSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNP 120
           ++ LR R     +RD SA +T  L+ VAIP L+PWW+  IG+IFAI++ K LYGGLG N 
Sbjct: 61  VLKLRARPVGKTIRDNSAALTGLLIGVAIPALAPWWIAAIGVIFAILVVKQLYGGLGNNI 120

Query: 121 FNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGI 180
           FNPAM AYV+LLISFP+QMT+W+AP         L+ S S+IF G D++   +   R GI
Sbjct: 121 FNPAMAAYVMLLISFPMQMTTWVAPSGAALHDLGLMQSLSVIFQGADAE--QVLAYRAGI 178

Query: 181 DGITMATPLDAFKTSLKAGHTMSETLTQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIR 240
           DG+TMATPLDA KT L  G T+ E LT+  FS   GIGW  +N+AYL GGL++LKL++IR
Sbjct: 179 DGVTMATPLDAVKTGLSTGLTLDEILTKASFSDGFGIGWALINLAYLAGGLVMLKLKLIR 238

Query: 241 WHIPMAMLAGLVFTALLAQLFAPGTTASPMIHLLSGATMLGAFFIATDPVSASTTDKGRL 300
           W I  A+LA L   A +  L +P T   P++HL SGATML AFFIATDPV+A+T+ +GRL
Sbjct: 239 WQISTAILASLFVCASIGYLLSPDTHMGPLLHLFSGATMLAAFFIATDPVTAATSTRGRL 298

Query: 301 IYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPRTYGH 348
           I+G  IG +V+LIRS+ G+PD  AFAVLLAN+C P IDYY KPR YGH
Sbjct: 299 IFGSLIGLLVYLIRSFCGYPDAFAFAVLLANLCAPFIDYYVKPRAYGH 346