Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Klebsiella michiganensis M5al

 Score =  124 bits (311), Expect = 4e-33
 Identities = 87/274 (31%), Positives = 124/274 (45%), Gaps = 50/274 (18%)

Query: 80  VTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQM 139
           VT+ L A+ +PP  P W    G+ F +V+AK ++GG G+N  NPA+     L  ++P Q 
Sbjct: 161 VTSILFALIVPPTLPLWQAAFGITFGVVMAKEIFGGTGRNFLNPALAGRAFLFFAWPAQ- 219

Query: 140 TSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGIDGITMATPLDAFKTSLKAG 199
                                          +S   + T  DG + ATPL  + +    G
Sbjct: 220 -------------------------------ISGDLVWTAADGFSGATPLSQWASG--GG 246

Query: 200 HTMSETLT------QPQFSG-FAGIGWEWVNIAYLLGGLILLKLRIIRWHIPMAMLAGLV 252
            ++    T         F G   G   E   +  L+GG I++  R+  W I   +  G+V
Sbjct: 247 ESLVNVATGLPVSWMDAFLGKIPGSIGEVSTLMILIGGAIIIFGRVASWRIVAGVFIGMV 306

Query: 253 FTALLAQLFAPGTTASPMI------HLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFI 306
            TA+L      G+  +PM       HL+ G    G  F+ATDPVSAS TDKG+  YG  I
Sbjct: 307 ATAMLFNFI--GSDTNPMFAMPWYWHLVLGGFAFGMMFMATDPVSASFTDKGKWSYGLLI 364

Query: 307 GAMVFLIRSWG-GFPDGVAFAVLLANMCVPLIDY 339
           G M  LIR     +P+G+  A+L AN+  PL DY
Sbjct: 365 GVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDY 398