Pairwise Alignments

Query, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella amazonensis SB2B

 Score =  127 bits (319), Expect = 2e-34
 Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 14/211 (6%)

Query: 4   NRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVRDYV 63
           NR L++  ++ NNP  +Q+LG+C  LAVS+++  AL + +A   VLV SN  +SL+R ++
Sbjct: 7   NRELLMRPVFANNPVAMQVLGVCSALAVSNSMQTALVMTLAVTFVLVCSNFFISLIRAFI 66

Query: 64  PKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFASKND 123
           P  VRI   + IIASLV  V +++   A  L   L +F+ LI+TNCI++GRAEAFA K  
Sbjct: 67  PNSVRIIAQMTIIASLVIVVDMVLQDVAPDLSKQLSVFVSLIITNCIVMGRAEAFAMKEP 126

Query: 124 VLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLL---GEWAKVLRIEVFHFD 180
              + +D      G   +L+ +  +RE++G+GTLF  + L     G W   L  E+F   
Sbjct: 127 PHLSVMDAIGNAAGYGFILLSVAFVRELLGSGTLFGHSILKTIEQGGW--YLPNEMFK-- 182

Query: 181 SAFLLALLPPGAFIGVGFLIAAKSVIDKQTA 211
                  LPP AF  +G +I   ++  ++ A
Sbjct: 183 -------LPPSAFFLIGVIIWVVNIAQRKRA 206