Pairwise Alignments

Query, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella amazonensis SB2B

 Score =  140 bits (354), Expect = 1e-38
 Identities = 80/199 (40%), Positives = 123/199 (61%), Gaps = 8/199 (4%)

Query: 2   NENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVRD 61
           NE + ++   + NNNP  +Q+LG+C  LAV+S +  AL + +A   V   SN+ +S++R+
Sbjct: 3   NELKKVLTGPIINNNPIALQILGVCSALAVTSKLETALVMTLALTAVTAFSNLFISMIRN 62

Query: 62  YVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFASK 121
           ++P  VRI V + IIASLV  V  ++ AYAY +   L +F+ LI+TNCI++GRAEA+A K
Sbjct: 63  HIPSSVRIIVQMAIIASLVIVVDQILQAYAYDVAKQLSVFVGLIITNCIVMGRAEAYAMK 122

Query: 122 NDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFDS 181
              + + +DG   GLG  ++L+ +G +RE+ GNG+LF G ++L        +I    +  
Sbjct: 123 TPPMMSFMDGIGNGLGYGAILLSVGFVRELFGNGSLF-GVEIL-------SKISDGGWYQ 174

Query: 182 AFLLALLPPGAFIGVGFLI 200
              L LLPP AF  +G LI
Sbjct: 175 PNGLLLLPPSAFFLIGVLI 193