Pairwise Alignments

Query, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (328), Expect = 1e-35
 Identities = 79/209 (37%), Positives = 125/209 (59%), Gaps = 8/209 (3%)

Query: 1   MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60
           M   R ++   ++ NNP  +Q+LG+C  LAVS+++  AL + +A   VLV SN+ +S +R
Sbjct: 5   MTATRDILTGPIFANNPVAMQVLGVCSALAVSNSMQTALVMTLAVTFVLVFSNLIISSIR 64

Query: 61  DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120
           +++P  VRI   + +IASLV  V +++   AY L   L +F+ LI+TNCII+GRAEAFA 
Sbjct: 65  NFIPNSVRIIAQMTVIASLVIIVDMVLQDVAYELSRQLSVFVGLIITNCIIMGRAEAFAM 124

Query: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFD 180
           K     A +D     +G   +L+ +  +RE++G GTLF G ++L     K +  + ++  
Sbjct: 125 KMPPHLAVVDAMGNAMGYGVILLSVAFVRELLGAGTLF-GHEIL-----KTVENDGWYL- 177

Query: 181 SAFLLALLPPGAFIGVGFLIAAKSVIDKQ 209
            A  +  LPP AF  +G LI A +VI ++
Sbjct: 178 -ANEMFKLPPSAFFLIGLLIWAINVIQRK 205