Pairwise Alignments

Query, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Na+-translocating NADH-quinone reductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 24/168 (14%)

Query: 6   TLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIA-TLLVLVGSNVTVSLVRDYVP 64
           +L +  ++ +N      LG+C  LAVS  V  A+GLGIA T ++LV   V   L    + 
Sbjct: 6   SLFVRSIFVDNMIFAFFLGMCSYLAVSKNVKTAVGLGIAVTFVLLVTLPVNYLLQTKVLA 65

Query: 65  KEVRIP----------VFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGR 114
               I           +F+ +IA +V  V++++  ++  LY SLGIF+PLI  NC I+G 
Sbjct: 66  ANAIIEGVDLSFLSFILFIAVIAGIVQLVEMVVERFSPSLYASLGIFLPLIAVNCAIMG- 124

Query: 115 AEAFASK------------NDVLPAALDGFWMGLGMTSVLVVLGSLRE 150
           A  F  +             DV  A       G+G    +V L ++RE
Sbjct: 125 ASLFMQQRINLGASDPKYIGDVWDALSYALGSGIGWLLAIVGLAAIRE 172