Pairwise Alignments

Query, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (352), Expect = 2e-38
 Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 8/198 (4%)

Query: 3   ENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVRDY 62
           E + ++   + NNNP  +Q+LG+C  LAV+S +  AL + +A   V   SN+ +S++R++
Sbjct: 6   ELKQVLTGPIVNNNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMIRNH 65

Query: 63  VPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFASKN 122
           +P  VRI V + IIASLV  V  L+ AYAY +   L +F+ LI+TNCI++GRAEA+A K 
Sbjct: 66  IPSSVRIIVQMTIIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEAYAMKT 125

Query: 123 DVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFDSA 182
             + + +DG   GLG  ++L+ +G +RE+ GNG+LF G  +L        +I    +   
Sbjct: 126 PPMMSFMDGIGNGLGYGAILLAVGFVRELFGNGSLF-GVQIL-------HKISEGGWYQP 177

Query: 183 FLLALLPPGAFIGVGFLI 200
             L LLPP AF  +G LI
Sbjct: 178 NGLLLLPPSAFFLIGILI 195