Pairwise Alignments

Query, 213 a.a., endonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., DNA-(apurinic or apyrimidinic site) lyase / endonuclease III from Synechococcus elongatus PCC 7942

 Score =  129 bits (325), Expect = 3e-35
 Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 5   KRIEILERLRAHNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVANTPQTM 64
           + + +L  L+   P+    L++ +P +LL+A +LSAQ TD  VN  T  L+A        
Sbjct: 11  RALAVLAELKQLYPEAPCSLDYETPLQLLVATILSAQCTDARVNLVTPALFARFPDAPAF 70

Query: 65  LDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANV 124
               V  ++E I++ G + +KA+N+    R ++E + GEVP+    L  L GV RKTANV
Sbjct: 71  AAADVGEIEELIRSTGFYRNKAKNIHAASRRIVEVYGGEVPQSMPELLTLAGVARKTANV 130

Query: 125 VLNTAFGWPT-IAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHW---LI 180
           VL  AFG    + VDTH+ R++NR  F    +  ++E  L+K++P     D  +W   L+
Sbjct: 131 VLAHAFGINAGVTVDTHVKRLANRLGFTTHTDPIKIEQDLMKLLPQP---DWENWSIRLV 187

Query: 181 LHGRYTCVARKPRCGSCIIEDLC 203
            HGR  C ARKP C  C + D C
Sbjct: 188 YHGRAVCDARKPACDRCSLADHC 210