Pairwise Alignments

Query, 213 a.a., endonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., endonuclease III from Methanococcus maripaludis JJ

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 7/162 (4%)

Query: 27  NSPFELLIAVLLSAQATDVSVNKATDKLYAVAN-TPQTMLDLGVDGVKEYIKTIGLFNSK 85
           N  FE+ +  +L+   +  SV K+   L  +   TP+ + +L ++ +KE IK  G +N K
Sbjct: 55  NQCFEICVGAILTQNTSWPSVEKSLKNLRNLIEITPENIHNLDIEQLKEAIKPSGYYNQK 114

Query: 86  AENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVS 145
           +  +        + +   VP  RE L  L GVG +TA+ +L  AF  P+  VDT+  R+ 
Sbjct: 115 SIRLKSFSEFFTKLNN--VPT-REELLKLNGVGPETADSMLLYAFKVPSFVVDTYTKRIL 171

Query: 146 NRTKFAVG-KNVDEVEHKLLKVVPNEFKL--DVHHWLILHGR 184
                  G +  D+++    + +P   ++  + H  ++ H +
Sbjct: 172 INLNLIEGSEKYDKIKGLFEENIPKNLEIYQEYHALIVEHAK 213