Pairwise Alignments

Query, 213 a.a., endonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., endonuclease III, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  142 bits (357), Expect = 8e-39
 Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)

Query: 5   KRIEILERLRAHNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVANTPQTM 64
           + +++L+ LR   P P T L   +P+ELL+A +L+AQ TD  VNK T  L+A+   P  +
Sbjct: 9   RALQVLDLLRRRYPTPATHLVARNPWELLVATVLAAQCTDERVNKVTPHLFALWPDPAAL 68

Query: 65  LDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANV 124
                + ++E I + G + +KA+N++   R + E H GEVP   + L  LPGV RKTANV
Sbjct: 69  ACATQEALEEVIHSTGFYRNKAKNLLGAARRVTEVHGGEVPRTMDELVQLPGVARKTANV 128

Query: 125 VLNTAFGW-PTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWLILHG 183
           VL   FG    IAVDTH+ R+ +R       +   VE  L+++ P E   DV+H L+  G
Sbjct: 129 VLWGGFGVNEGIAVDTHVKRIVHRMGLTKETDPVAVERDLMRLYPREAWGDVNHMLVWFG 188

Query: 184 RYTCVARKPRCGSCIIEDLC 203
           R+ C ARKP C  C +  +C
Sbjct: 189 RHVCDARKPLCEQCEMAGIC 208