Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

 Score =  100 bits (250), Expect = 3e-26
 Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 14/281 (4%)

Query: 15  LSASVASALEVRYMATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKINLDFEL 74
           L AS A+AL   +    ++  WQ+  +   ECRL+ PI  +G  EF  RAG++    F L
Sbjct: 11  LLASPANALT--FQTRLERVQWQVEGDQ-FECRLIQPIAGFGSGEFVRRAGEQAI--FRL 65

Query: 75  KMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQT----AWSLLSELE 130
           +         + +L++    W+P  G     NL       G I   +    A  LL+ L 
Sbjct: 66  QSPERWLGAGSATLLAAAAPWQPARGD---INLGVVSVGGGEIPFNSTQLQAGRLLAGLL 122

Query: 131 KGRYPTFSYQDWQSRDQRIEVALSSVLFQQPYNEFSDCISKLLPYSFEDISFTILHYDQG 190
           +GR P   ++     D  +E+ L    F + Y ++  C +KLLP +F+ +  + + +   
Sbjct: 123 EGRSPVVRHRTLHGGDT-LEIRLLPARFGKAYEDYRACTAKLLPVNFDQVRQSQIGFPS- 180

Query: 191 TSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFK 250
           + V L+   + +L  I +++R +  ++ + +  ++D++     +++LS +RA  ++EY  
Sbjct: 181 SDVVLDPLGRAKLDIILQFMRADPSVNRIELDGHSDNSGNRLLNRDLSRRRALAVQEYLV 240

Query: 251 SIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGR 291
           + G+P ++I ++ +G+R P+  N+S   + KNRRV + L R
Sbjct: 241 ANGVPVEQITLRFHGERYPLVANSSEANRAKNRRVTMRLAR 281