Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  240 bits (612), Expect = 3e-68
 Identities = 120/282 (42%), Positives = 184/282 (65%), Gaps = 1/282 (0%)

Query: 10  FAISTLSASVASALEVRYMATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKIN 69
           F I    A+ A A    Y+A+ +QS+W+++ NTP+ CRL H IP+YG A F+SRAGK  +
Sbjct: 3   FGIGLSLATTAQAELRHYVASLEQSSWRLSGNTPIICRLEHEIPSYGKAVFTSRAGKDHD 62

Query: 70  LDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSEL 129
           L+F L M     +  +  L+SM P WRPG  +  IT+L + K F G +  + AWS+L+EL
Sbjct: 63  LNFSLDMWVKPDEVTSAKLMSMAPAWRPGVVSRPITDLTYQKYFSGEVPKKAAWSMLNEL 122

Query: 130 EKGRYPTFSYQDWQSRDQRIEVALSSVLFQQPYNEFSDCISKLLPYSFEDISFTILHYDQ 189
           E+G  PTF Y DW +R  ++ V LS+  F + Y EF  C++ LLPYSF+DI+FT+L Y+ 
Sbjct: 123 ERGMQPTFYYADWYNRSSKVAVGLSAANFGRRYAEFKSCLANLLPYSFDDIAFTVLTYEF 182

Query: 190 GTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYF 249
           G S EL + S+ ++A++ EY+ Y+ +++LVL+  YTDS    + ++ +SE+RA  +++ F
Sbjct: 183 GGS-ELTRYSKAQIAKVQEYLSYDPEVELVLIDAYTDSFGGRSVNKKVSEKRANSVKQLF 241

Query: 250 KSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGR 291
            S G+P +RI   G+G+RR +A N +   + +NRRVVI L +
Sbjct: 242 LSAGIPNERIHTYGHGERRHVASNDTIDERARNRRVVIRLSK 283