Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  241 bits (616), Expect = 1e-68
 Identities = 121/284 (42%), Positives = 186/284 (65%), Gaps = 2/284 (0%)

Query: 9   LFAISTLSASVASALEVR-YMATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKK 67
           L  +S L     +  E+R Y+A+  +S W+++ N+P+ CRL H IP+YG A F+S AGK+
Sbjct: 5   LILVSILCVPATAMAELRHYVASLGESQWRVSQNSPIVCRLEHDIPSYGKAIFTSEAGKQ 64

Query: 68  INLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLS 127
           +NL+F L M          +L+S  P WRPG  +  IT+L++ K F+G +  + AWS+LS
Sbjct: 65  LNLNFTLDMWVKPDQVTQATLMSRAPQWRPGVVSKEITSLRYQKYFNGEVPKRAAWSMLS 124

Query: 128 ELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQPYNEFSDCISKLLPYSFEDISFTILHY 187
           EL +G  PTF Y DW +   +I V LS+  F + Y EF  C+S LLPYSFEDI+FT+L+Y
Sbjct: 125 ELSRGMEPTFYYADWYNESNKIAVGLSAANFGRKYAEFKSCLSHLLPYSFEDIAFTVLNY 184

Query: 188 DQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLRE 247
           ++G   +L + SQ++L++I EY+ Y+ D++LVLV  YTDS    + +Q +S++RAE +++
Sbjct: 185 EEG-GTDLTRFSQQQLSRIQEYLSYDPDVELVLVDAYTDSYGGRSVNQKVSDKRAESVKD 243

Query: 248 YFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGR 291
           +F + G+P+DRI   G+G+RR +A N     +  NRRVVI + +
Sbjct: 244 FFVASGIPQDRIVTVGHGERRHVASNDDIEERALNRRVVIRISK 287